PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.15G184200.1.p
Common NameGLYMA_15G184200
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family FAR1
Protein Properties Length: 564aa    MW: 65577.7 Da    PI: 8.3807
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.15G184200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.21.1e-1260149189
                 FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 
                          +fYn++Ak+ GF +r+++sk +       +  +vC +eg+++ +            ++ r+ ++ rt+C+a+  v++ +  ++w++++++
  Glyma.15G184200.1.p  60 EFYNSFAKKNGFGIRIRSSKPK-------MTVLVCCCEGQHKVKGLVdkdthdnICQSIRKCSTLRTSCQASPIVSRGDiASNWVIKSFS 142
                          6****************98877.......678999999998877655555665556667788999**************9********** PP

                 FAR1  83 leHnHel 89 
                          ++HnH +
  Glyma.15G184200.1.p 143 NDHNHVM 149
                          *****87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.8E-1060149IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 564 aa     Download sequence    Send to blast
MTDTLGNIEI QEIESINVMP MDTPIPYGEV MPGDTSNDAE ELNIQPCLGL EFESLEKVRE  60
FYNSFAKKNG FGIRIRSSKP KMTVLVCCCE GQHKVKGLVD KDTHDNICQS IRKCSTLRTS  120
CQASPIVSRG DIASNWVIKS FSNDHNHVML SPKSVCYMRC HKKMSVVAQS LVEKFEEEGL  180
LTGKVASIFN NSDSYFSDRD CWNHIRNLRR KNLDLGDVEV VFNYCKRKQV ENPNFFYEIQ  240
CDDDSRMVNF LWVDARSRVA YQKFGDVITF DTTYKTNKYN ESEKSFTWLF QTWLEAMGGK  300
KSVSIITNQD LTIGVAIKKS TFKRELKRCI RESPCIAIFE EEWKRLMKEY NLEGNEWLQG  360
LYRIKESWIP IFNRSTFFAG MNTTQRSEGI NAFFDSFVHS RTRLQEFVVN FEKAVDCRLE  420
AKEREDYKSR HKSRILSTGS KVEHHAEFFY TRNVFGKFQD ELRKVNEFTK KKIRRDGPSH  480
VYQTQRLLNV TANFLNLWGY CVDTLVIFQA KGVVQIPDHF VLQCWTKDAN KFIEVSDVEN  540
NFDGQSTTSR ILRRMHAQVK RDI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0R0G2U30.0A0A0R0G2U3_SOYBN; Uncharacterized protein
STRINGGLYMA15G20510.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1579835
Representative plantOGRP3012351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-92FAR1-related sequence 5